HANYANG UNIVERSITY DATA MINING & BIOINFORMATICS LAB.

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International Journal

44

Jeon, Jehyun, et al. "Genomic Determinants Encode the Reactivity and Regioselectivity of Flavin-Dependent Halogenases in Bacterial Genomes and Metagenomes." Msystems 6.3 (2021): e00053-21. [DOI: 10.1128/mSystems.00053-21]

43

Kim, Jieun, et al. "High fecal carriage of bla CTX-M, bla CMY-2, and plasmid-mediated quinolone resistance genes among healthy Korean people in a metagenomic analysis." Scientific reports 11.1 (2021): 1-9. [DOI: 10.1038/s41598-021-84974-4]

42
Park, Yesol, et al. "Discovering microbe-disease associations from the literature using a hierarchical long short-term memory network and an ensemble parser model." Scientific reports 11.1 (2021): 1-12. [DOI: 10.1038/s41598-021-83966-8]
41

Gwak, Ho-Jin, Seung Jae Lee, and Mina Rho. "Application of computational approaches to analyze metagenomic data." Journal of Microbiology (2021): 1-9. [DOI: 10.1007/s12275-021-0632-8]

40

Dhungel, Eliza, et al. "MegaR: an interactive R package for rapid sample classification and phenotype prediction using metagenome profiles and machine learning." BMC bioinformatics 22.1 (2021): 1-12. [DOI: 10.1186/s12859-020-03933-4]

39

Gwak, Ho-Jin, and Mina Rho. "Data-Driven Modeling for Species-Level Taxonomic Assignment From 16S rRNA: Application to Human Microbiomes." Frontiers in microbiology  11 (2020): 2866. [DOI: 10.3389/fmicb.2020.570825]

38

Kim, Jieun, et al. "Quantitative characterization of Clostridioides difficile population in the gut microbiome of patients with C. difficile infection and their association with clinical factors." Scientific reports 10.1 (2020): 1-11. [DOI: 10.1038/s41598-020-74090-0]

37

Seneviratne, Chaminda Jayampath, et al. "Oral microbiome-systemic link studies: perspectives on current limitations and future artificial intelligence-based approaches." Critical reviews in microbiology 46.3 (2020): 288-299. [DOI: 10.1080/1040841X.2020.1766414]

36

Lim, Suk-Kyung, et al. "Antibiotic resistomes discovered in the gut microbiomes of Korean swine and cattle." GigaScience 9.5 (2020): giaa043. [DOI: 10.1093/gigascience/giaa043]

35

Han-Ki, Park, et al. "Altered gut microbiota by azithromycin attenuates airway inflammation in allergic asthma." Journal of Allergy and Clinical Immunology 145.5 (2020): 1466. [DOI: 10.1016/j.jaci.2020.01.044]

34

Chung, Youn Wook, et al. "Functional dynamics of bacterial species in the mouse gut microbiome revealed by metagenomic and metatranscriptomic analyses." PloS one 15.1 (2020): e0227886. [DOI:10.1371/journal.pone.0227886]

33

 

Rho, Mina, and Woon Ju Song. "Discovery of Novel Gene Functions by Chemistry-Guided Targeted Sequence Analysis." (2019): 10-11. [DOI:doi.org/10.1021/acs.biochem.9b00790]
32

Kim, TaeGuen, et al. "A multimodal deep learning method for android malware detection using various features." IEEE Transactions on Information Forensics and Security 14.3 (2018): 773-788. [DOI:10.1109/TIFS.2018.2866319]

31

Bae, Junwoo, et al. "iMGEins: detecting novel mobile genetic elements inserted in individual genomes." BMC genomics 19.1 (2018): 944.[DOI:10.1186/s12864-018-5290-9]

30

Lim, Mi Y., Youna Cho, and Mina Rho. "Diverse Distribution of Resistomes in the Human and Environmental Microbiomes." Current genomics 19.8 (2018): 701-711. [DOI:10.2174/1389202919666180911130845]

29

Shin, Jae Hong, et al. "Integrative metagenomic and biochemical studies on rifamycin ADP-ribosyltransferases discovered in the sediment microbiome." Scientific reports 8.1 (2018): 12143.[DOI:10.1038/s41598-018-30547-x]

28

Kim, Min-Hye, et al. "Lactobacillus plantarum-derived Extracellular Vesicles Protect Atopic Dermatitis Induced by Staphylococcus aureus-derived Extracellular Vesicles." Allergy, asthma & immunology research 10.5 (2018): 516-532. [DOI:10.4168/aair.2018.10.5.516]

27

Kim, Yihwan, Jehyun Jeon, Min Seok Kwak, Gwang Hoon Kim, InSong Koh, and Mina Rho. "Photosynthetic functions of Synechococcus in the ocean microbiomes of diverse salinity and seasons." PloS one 13, no. 1 (2018): e0190266. [DOI:10.1371/journal.pone.0190266]

26

Kim, Min-Hye, Mina Rho, Jun-Pyo Choi, Hyun-Il Choi, Han-Ki Park, Woo-Jung Song, Taek-Ki Min et al. "A metagenomic analysis provides a culture-independent pathogen detection for atopic dermatitis." Allergy, asthma & immunology research9, no. 5 (2017): 453-461. [DOI:10.4168/aair.2017.9.5.453]

25

Kim, Y., Koh, I., Lim, M. Y., Chung, W. H., & Rho, M. (2017). Pan-genome analysis of Bacillus for microbiome profiling. Scientific reports7(1), 10984.[DOI:10.1038/s41598-017-11385-9]

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